| Pos | Team | PL | GD | PTS |
|---|---|---|---|---|
| East A | ||||
| 1 |  Vegalta Sendai | 3 | +5 | 9 |
| 2 |  Blaublitz Akita | 3 | +3 | 9 |
| 3 |  Montedio Yamagata | 3 | +2 | 8 |
| 4 |  Shonan Bellmare | 3 | +4 | 6 |
| 5 |  Yokohama FC | 3 | +2 | 3 |
| 6 |  Vanraure Hachinohe | 2 | 0 | 3 |
| 7 |  Thespakusatsu Gunma | 2 | -1 | 1 |
| 8 |  Tochigi SC | 2 | -2 | 0 |
| 9 |  Sagamihara | 2 | -5 | 0 |
| 10 |  Tochigi City | 3 | -8 | 0 |
| East B | ||||
| 1 |  Omiya Ardija | 3 | +8 | 9 |
| 2 |  FC Gifu | 3 | +3 | 8 |
| 3 |  Ventforet Kofu | 3 | +5 | 8 |
| 4 |  Iwaki | 3 | +3 | 7 |
| 5 |  Fujieda MYFC | 3 | 0 | 4 |
| 6 |  Matsumoto Yamaga | 3 | -2 | 3 |
| 7 |  Consadole Sapporo | 3 | -2 | 2 |
| 8 |  Jubilo Iwata | 3 | -2 | 2 |
| 9 |  Parceiro Nagano | 3 | -2 | 2 |
| 10 |  Fukushima United | 3 | -11 | 0 |
| West A | ||||
| 1 |  Kochi United | 3 | +3 | 7 |
| 2 |  Tokushima Vortis | 3 | +8 | 6 |
| 3 |  Kataller Toyama | 3 | +4 | 6 |
| 4 |  Albirex Niigata | 3 | 0 | 6 |
| 5 |  Imabari | 3 | +1 | 5 |
| 6 |  Nara Club | 3 | -5 | 4 |
| 7 |  Ehime FC | 3 | -1 | 3 |
| 8 |  Kanazawa | 3 | -1 | 3 |
| 9 |  Kamatamare Sanuki | 3 | -6 | 3 |
| 10 |  Osaka | 3 | -3 | 2 |
| West B | ||||
| 1 |  Oita Trinita | 3 | +6 | 9 |
| 2 |  Tegevajaro Miyazaki | 3 | +4 | 9 |
| 3 |  Roasso Kumamoto | 3 | +4 | 7 |
| 4 |  Kagoshima United | 3 | +2 | 6 |
| 5 |  FC Ryukyu | 3 | -2 | 4 |
| 6 |  Sagan Tosu | 3 | -1 | 3 |
| 7 |  Renofa Yamaguchi | 3 | -1 | 3 |
| 8 |  Gainare Tottori | 3 | -2 | 3 |
| 9 |  Biwako Shiga | 3 | -3 | 1 |
| 10 |  Kitakyushu | 3 | -7 | 0 |